CDS

Accession Number TCMCG007C51167
gbkey CDS
Protein Id XP_009111115.1
Location join(22547924..22548107,22548394..22548505,22548614..22548702,22548793..22548861,22548931..22549063,22549214..22549372,22549786..22550134,22550322..22550434,22550532..22550679,22550787..22551253,22551331..22551496,22551582..22552772)
Gene LOC103836582
GeneID 103836582
Organism Brassica rapa

Protein

Length 1059aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009112867.3
Definition TNF receptor-associated factor homolog 1b isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category T
Description phosphorelay sensor kinase activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K14509        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04016        [VIEW IN KEGG]
ko04075        [VIEW IN KEGG]
map04016        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006109        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009723        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010104        [VIEW IN EMBL-EBI]
GO:0010105        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0010675        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032881        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042562        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051740        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070297        [VIEW IN EMBL-EBI]
GO:0070298        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072328        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902532        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000904        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACAGAGACTGTTAATGAAGATTCTGGAGTGGGGCGATCAGTAGAGGCGAGTTCTAATGGACACCACAGTCTATCAGGAGAATCACTCTCACTCTCTAAGTGGCGGTCTTCTGCTCAGGTTGAGAATGGGACGCCTTCCACATCCCTCTCTTACTGGGACACCGATGATGATGAAGACCACGGCCTTAAACCCTCTCAGTTATTTGGGAAACACAAATGGAAGATAGAGAAATTCTCAGAAATCAAGAAAAGGGAGCTCCGTAGCAATTATTTTGAAGCTGGCGGCTACAAATGGTACATTTTAATTTATCCACAAGGATGTGATGTTTGCAATCATCTCTCCTTGTTTCTCTGTGTTGCAAACCATGATAAACTTCTTCCAGGCTGGAGTCATTTCGCTCAGTTTACCATAGCTGTGGTGAATAAAGATCCAAAGAAATCCAAATTTTCAGATACGCTTCACCGGTTTTGGAAGAAGGAGCATGATTGGGGATGGAAAAAGTTTATGGAGTCAACTAAGTTACAGGATGGGTTCATAGATGATTCCGACTCTCTTACAATTGAAGCTCAAGTTCAGGTGATCAGGGAAAGGGTGGACCGACCTTTTCGCTGCCTTCACTGCGGTTATAGGAGAGAGCTTGTTAGGGTGTATTTGTCAAACGTAGAGCAAAGTTGCCGACGTTTTGTGGAAGAGAAAAGAAGCAAGCTTGGGAGGTTGATAGAGGACAAGGCAAAATGGACGAGCTTCGGTGTTTTCTGGTTAGGGATGGACCAAAACTCTAGGCATCGGATGTCTAGAGAGAAAATGGATGTAATCCTAAAAGGAATTGTAAAACACTTTTTCATAGAGAAGGAAGTTACATCCACTTTGGTGATGGATTCCTTGTATAGTGGGTTGAAGGCTCTTGAAGGCCAATCTAAGAGCAAGAAAGCTAGGCCAAGATCGTTAGATGCCAAGGAATGCCCAGCTCCGATTGTTAGTGTGGACAAAGATATGTTCGTATTAGTTGATGATGTGCTATTACTCTTAGAGAGAGCTGCTCTAGAACCGTTGCCTCCAAAAGAAAATAAAGCCCCCCAAAACCGTACAAAGGATGGCAATGATGGAGAAGAGGTCAGCAATGAAGCCGTTGAGCGTGATGAGAGACATCTAACTGAGTTGGGCAGACGAGCTGTGGAGATATTTGTTCTTACCCATATATTCAACAAAATCGAGGTTGCATATAAAGAAGCCATTGCGCTAAAAAGGCAGGAAGACTTAATTCGTGAGGAAGAGGAAGAGTGGTTAGCAGAAACCGAACAGAGAGCCAAAAGAGGAGCAGCAGAGAGAGAGAAGAAATCTAAGAAGAAACAGGCAAAGCAGAAACGGAACAAAAATAAAGGGAAGGACAAAAAGAAGGAAGAAAAGGTGACATTAGCAACACATGGAAAGGATCTCGAGGAAAACCACCATGATGAGGAGGAAAATGATTCTGTTACAGAGAAAGCACAACCCTCAGCTGAAAAGACTGATACTCTTGAAGAAGTGTCCGACATATCTGACTCCGTGGATGGTTCGGCTGACATTCTTCACCCTGATTTAGAAGATGGGGACAGTAGTTCTGTTCATTGGGATGCCGATGCTTTGGAAATTCATCCTCCTCCATCAGAAGGGAGCAGCATTTCCATATCTACACCCAATGGAATTGCGGAAAGAAAGACTCAGTCTACTATGGATGATAGTTCCTCGACTTGTTCTAACGATTCTATCCGGTCAGGTGTTACCAACGGCTCTTACAAAGGGAATATGTTGAATTTCCGAAACCAGAAGTCGCCAAACCAAGGTAAGAACCAGCAAGTAAAAATAACATCTGATACCCGCAGTTTAGTGACTGAACCAGATGATGATCAACCAAAGAGTCAGAATTCTTCTTCCGAATCTGACTGGGTTGTTGTCTCCCATATCCAGGAATTAGAGAGCTCTCGGAATCGTAGACCCGTGGAGAAGCAACGCAACGTGGCTCAAGTCGTTGTGAACTCGGTTCACATGGATCGACCTGAAAAGAAAAGCGCTGCTGTGCTTTCTTCTCCAAGAACTGCTGCTAAGAATCCTTCATCATTAACTCAGACAAAACTGGAGAAAAGGAGCGTTTCAAACGCAGACGCTGTTCCAAACAAGAAAGTAATGTCAGCTACTGGACCACCTTCATCAAGTCAGGTGTCGCCGGCATCTTCAGATAGTCAGTCGCAAGCTGGTGGTCTCAAAGCTGATATGCAAAAGATCTCTGCTCCAAAACAACCTGCAACAACAACAATTGTAACAAGGCCTTTTAGTGCTCCAATAATCCCTGCGATGCGACCCGCCCCTGTTATCGTCTCCTCCTCGGTTCAACCAACAACATCCCTTCCTCGGTCTGTTAGCTCAGCTGGTCGTCTAGGTCCTGACTCTTCACTACGCAACCAACAATCTTACACTCCTCAATCCTATAAACACGCCATAGTTGGTAACTCTCCTGGTTCGTCATCTAGTTTCAACCACCACCCAAGCTCTCATGGAGTTGTCCCAACCACATTGCCGTCAGCATCTTACACACAAACACCGGCTTATCAGTCGTCAAGCTTCCCTTTCGGTCAGGATGGGTCCTTTCGATCAAGGAGTTTTAATTCTGTAAACATGGGAATGAACAACCGTTACACACCGGCCGTGGCTAGCAACACTTCTCTGAACCACATTGATATCGAGACAGCGCGACAACAAGCACAAAGCTTGATGACCGACGAGTTCCCTCACCTCGACATCATCAACGACCTGCTGGAAGACGAAAACTGCAGCAACACGGTGTTTAATGGAAGCATATTCAATTCACAATCCCAGCTGTTCAACAGTCAATACTCTTACCATGGTGGTGGCAGTGCTGATTTAGGCATCTCAGGTGAGTTATTGTCTAGTGGCAGGTCCAGGAGTTTTGGAGATGAAGGATTCCACTACATGGCACGTGGACCATATGCAGAAGGTTTGATACCGACGCAGTGGCAGATGGCAAACATGGACCTGTCTTTACTTGCTATGAGGAATAGTAACGTGGAAGACACAGCATCATACCATCACACATACAACTTTGGATTGGACTCTACGAATCAGAGTTTTTCTTCAGGGATCAATGGCTACACTGAGTTCAGGCCGTCCAATGGTCACTGA
Protein:  
MTETVNEDSGVGRSVEASSNGHHSLSGESLSLSKWRSSAQVENGTPSTSLSYWDTDDDEDHGLKPSQLFGKHKWKIEKFSEIKKRELRSNYFEAGGYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWSHFAQFTIAVVNKDPKKSKFSDTLHRFWKKEHDWGWKKFMESTKLQDGFIDDSDSLTIEAQVQVIRERVDRPFRCLHCGYRRELVRVYLSNVEQSCRRFVEEKRSKLGRLIEDKAKWTSFGVFWLGMDQNSRHRMSREKMDVILKGIVKHFFIEKEVTSTLVMDSLYSGLKALEGQSKSKKARPRSLDAKECPAPIVSVDKDMFVLVDDVLLLLERAALEPLPPKENKAPQNRTKDGNDGEEVSNEAVERDERHLTELGRRAVEIFVLTHIFNKIEVAYKEAIALKRQEDLIREEEEEWLAETEQRAKRGAAEREKKSKKKQAKQKRNKNKGKDKKKEEKVTLATHGKDLEENHHDEEENDSVTEKAQPSAEKTDTLEEVSDISDSVDGSADILHPDLEDGDSSSVHWDADALEIHPPPSEGSSISISTPNGIAERKTQSTMDDSSSTCSNDSIRSGVTNGSYKGNMLNFRNQKSPNQGKNQQVKITSDTRSLVTEPDDDQPKSQNSSSESDWVVVSHIQELESSRNRRPVEKQRNVAQVVVNSVHMDRPEKKSAAVLSSPRTAAKNPSSLTQTKLEKRSVSNADAVPNKKVMSATGPPSSSQVSPASSDSQSQAGGLKADMQKISAPKQPATTTIVTRPFSAPIIPAMRPAPVIVSSSVQPTTSLPRSVSSAGRLGPDSSLRNQQSYTPQSYKHAIVGNSPGSSSSFNHHPSSHGVVPTTLPSASYTQTPAYQSSSFPFGQDGSFRSRSFNSVNMGMNNRYTPAVASNTSLNHIDIETARQQAQSLMTDEFPHLDIINDLLEDENCSNTVFNGSIFNSQSQLFNSQYSYHGGGSADLGISGELLSSGRSRSFGDEGFHYMARGPYAEGLIPTQWQMANMDLSLLAMRNSNVEDTASYHHTYNFGLDSTNQSFSSGINGYTEFRPSNGH